Researcher in Artemia Genomics and Bioinformatics

Sveriges lantbruksuniversitet / Kemiingenjörsjobb / Uppsala
2023-06-27
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Department of Animal Nutrition and Management

The Department of Animal Nutrition and Management (HUV) conducts both basic and applied research from a systems perspective, with the environment and animal welfare in focus. We work with both more general issues regarding future feed and animal care, as well as more fundamental issues such as the animal's nutritional physiology, intestinal function, and metabolism. The goal is to create ethical, economical, and sustainable production for society with good animal welfare that guarantees food of the highest quality. Our research concerns farm production animals, farmed fish and crustaceans, and sports and companion animals. HUV is responsible for undergraduate, research, and postgraduate education in the subject areas of nutritional physiology, feed science, management issues, and aquaculture. HUV offers an inspiring research environment where we conduct research and teaching in collaboration with a number of different departments within SLU and with other Swedish, and foreign universities.

The Aquaculture Research Group at HUV carries out high-quality basic and applied research on various aspects of nutrition, health, and host-microbiota interactions in farmed aquatic animals. Some of the cutting-edge research projects were conducted in the framework of collaboration with research institutes and private industries in Europe, Asia, and Africa. One of the major focuses of the group lies in studying the functional responses of the brine shrimp Artemia at the genomics, proteomics, and epigenomics levels in response to environmental cues. To address these research questions, state-of-the-art analytical toolboxes for genomics, proteomics, and epigenomics assays amongst others are being used.

Read more about the department here and read more about our benefits and what it is like to work at SLU via the following link.

Position Summary:

We are seeking a highly motivated and skilled researcher to join our team as a Researcher in Artemia Genomics and Bioinformatics. The successful candidate will play a crucial role in conducting cutting-edge research and data analysis related to Artemia using genomic and bioinformatics tools. The major task of the candidate is to conduct mining of Artemia genes associated with stress and immunity and also to develop OMICS toolbox for positioning Artemia as a model organism for biological research. The position offers an exciting opportunity to contribute to the understanding of Artemia biology and its applications in the aquaculture field. The candidate is also expected to take the main responsibility for report writing and for scientific publication.

Duties:
The selected candidate is expected to:

• Conduct comprehensive genomic analysis of Artemia species, that includes genome sequencing, assembly, annotation, and comparative genomics.
• Utilize advanced bioinformatics tools and algorithms to analyze genomic data, identify genetic variations, perform gene expression profiling, and predict functional elements in Artemia.
• Collect, curate, and integrate diverse biological datasets to enhance the understanding of Artemia genetics and genomics. Employ statistical methods to analyze large-scale datasets and derive meaningful biological insights.
• Design and implement research projects aimed at elucidating specific aspects of Artemia genomics and biology.
• Collaborate with multidisciplinary teams, including molecular biologists, geneticists, and computational biologists, to integrate experimental and computational approaches in Artemia research.
• Prepare research findings for publication in peer-reviewed journals and present results at scientific conferences and meetings.

Qualifications:
Interested and eligible candidates must have PhD degree in applied biological sciences, preferably with a focus on Artemia genomics and bioinformatics. Candidates with a strong background in biology and experience in genomics or bioinformatics in farmed crustaceans will also be considered. Demonstrated experience in genomic data analysis, bioinformatics, and next-generation sequencing technologies. Experience with Artemia or other crustacean species is a strong prerequisite. The candidate should be fluent in spoken and written English and have experience in effectively communicating research findings within and outside of academia. Previous peer-reviewed scientific publications especially on Artemia biology are highly desirable.

Place of work:
Uppsala

Form of employment:
Temporary employment, 6 months.

Extent:
25%

Starting date:
October 2023 or by agreement

Application:
We welcome your application no later than 2023-07-31, use the button below.

Your application should include:

i) Summary of research experience indicating the fulfillment of qualifications required for the position

ii) Curriculum Vitae including complete publication list clearly indicating peer-reviewed and non-peer-reviewed publications

iii) contact information for two reference persons.

Adacemic union representatives:
https://internt.slu.se/en/my-employment/employee-associations/kontaktpersoner-vid-rekrytering/

Sveriges lantbruksuniversitet (SLU) har en nyckelroll i utvecklingen för hållbart liv, grundad i vetenskap och utbildning. Genom vårt fokus på samspelen mellan människa, djur och ekosystem och ett ansvarsfullt brukande av naturresurserna bidrar vi till en hållbar samhällsutveckling och goda livsvillkor på vår planet. Huvudorter är Alnarp, Umeå och Uppsala, men verksamhet bedrivs också på forskningsstationer, försöksparker och utbildningsorter i hela landet.

SLU har drygt 3000 medarbetare, 5000 studenter och forskarstuderande och en omsättning på över tre miljarder kronor. Universitetet satsar på attraktiva miljöer på sina campusområden. Vi arbetar för en jämställd och inkluderande arbetsmiljö där öppna samtal mellan människor med olika erfarenheter lägger grunden för vetenskaplighet, kreativitet och utveckling. Vi välkomnar därför personer med olika bakgrunder och perspektiv att söka den aktuella anställningen.

Ersättning
Fast månadslön

Så ansöker du
Sista dag att ansöka är 2023-07-31
Klicka på denna länk för att göra din ansökan

Omfattning
Detta är ett deltidsjobb.

Arbetsgivare
Sveriges Lantbruksuniversitet (org.nr 202100-2817), http://www.slu.se

Arbetsplats
Sveriges lantbruksuniversitet

Kontakt
Kartik Baruah, Associate Professor
kartik.baruah@slu.se
+46 702749375

Jobbnummer
7919224

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