1-2 Bioinformaticians in Cancer Genomics

Karolinska Institutet, MEB / Biologjobb / Stockholm
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The Department of Medical Epidemiology and Biostatistics (MEB) is among the largest departments of epidemiology in Europe with special focus on increasing our knowledge of the aetiology of different diseases. Our department consists of researchers, doctoral students, biostatisticians, data collectors and database administrators as well as administrative personnel, in total some 250 staff. The department is situated at campus Solna. Further information can be found at ki.se/meb



Research Group

The research group of Cancer Genomics at MEB is headed by professor Henrik Grönberg and has a translational focus, with the goal to pursue clinically relevant research questions.

The division is currently conducting large studies in prostate cancer where genomic profiling is used to address tumor grading, prognostication at diagnosis and optimizing treatment in the metastatic setting. The research group is currently responsible for targeted sequencing in a clinical trial, where the tumor profile is used for randomization of colorectal cancer patients. During Q1 2018, the division will also enable live profiling of circulating tumor DNA in metastatic prostate cancer in a clinical trial setting. The Cancer Genomics group is part of a larger research environment with 20-25 persons focused on different aspects of prostate cancer.

Duties

The candidate bioinformatician will work within a core team consisting of four lab engineers, two currently employed bioinformaticians and one cancer researcher (Johan Lindberg) with a supervisory role. The currently employed bioinformaticians consists of one MSc performing routine analysis and one experienced PhD working with pipeline development in a cluster environment. The candidate will complement the current informatics staff by working with algorithmic development of in-house tools and the adaption of publically available software to the established analysis infrastructure. The team works in close collaboration with Clinical Genomics, ScilifeLab Stockholm and is partly located at SciLifeLab. Clinical Genomics hosts a larger team of bioinformaticians, working primarily with sequencing data from various diseases in translational projects.

Entry requirements

A person is eligible if he or she has a PhD. The PhD must have been performed in a relevant subject area.

Bases of assessment

We stress experience of algorithmic development when assessing applicants. Cancer genomics publications and postdoc experience from a relevant subject area is qualifying. Programming is conducted in BASH, R, Python, Perl and Java. Experience from working in a Unix/Linux cluster environment is required.

Application process
The application is to be submitted on the MyNetwork recruitment system.

At Karolinska Institutet a 6-month trial period is required for all permanent appointments.

Karolinska Institutet is one of the world's leading medical universities. Its vision is to significantly contribute to the improvement of human health. Karolinska Institutet accounts for the single largest share of all academic medical research conducted in Sweden and offers the country's broadest range of education in medicine and health sciences. The Nobel Assembly at Karolinska Institutet selects the Nobel laureates in Physiology or Medicine.
Pursuant to the regulations of the Swedish National Archives, applications are kept on file for two years after the appointment has gained legal force. The regulations do not apply to attachments that have been printed or otherwise published.
Karolinska Institutet strives to provide a workplace that has approximately the same number of women and men, is free of discrimination and offers equal opportunity to everyone.

For temp agencies and recruiters, and to salespersons: We politely, yet firmly, decline direct contact with temp agencies and recruiters, as well as those selling additional job announcements.

Varaktighet, arbetstid
100 %. Tillträde: According to agreement tillsvidareanställning

Publiceringsdatum
2017-10-25

Ersättning
Månadslön

Så ansöker du
Sista dag att ansöka är 2017-11-15
Ange följande referens när du ansöker: 2-4900/2017
Klicka på denna länk för att göra din ansökan

Kontakt
Åsa Agréus, HR Officer asa.agreus@ki.se
Johan Lindberg, Forskare johan.lindberg@ki.se

Företag
Karolinska Institutet, MEB

Adress
Karolinska Institutet, MEB
Karolinska Institutet, Box 281
17177 Stockholm

Kontorsadress
Karolinska Institutet, Box 281

Jobbnummer
3766139

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